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Exploring the solution landscape enables more reliable network community detection

Joaquín Calatayud, Rubén Bernardo-Madrid, Magnus Neuman, Alexis Rojas, and Martin Rosvall
Phys. Rev. E 100, 052308 – Published 21 November 2019

Abstract

To understand how a complex system is organized and functions, researchers often identify communities in the system's network of interactions. Because it is practically impossible to explore all solutions to guarantee the best one, many community-detection algorithms rely on multiple stochastic searches. But for a given combination of network and stochastic algorithms, how many searches are sufficient to find a solution that is good enough? The standard approach is to pick a reasonably large number of searches and select the network partition with the highest quality or derive a consensus solution based on all network partitions. However, if different partitions have similar qualities such that the solution landscape is degenerate, the single best partition may miss relevant information, and a consensus solution may blur complementary communities. Here we address this degeneracy problem with coarse-grained descriptions of the solution landscape. We cluster network partitions based on their similarity and suggest an approach to determine the minimum number of searches required to describe the solution landscape adequately. To make good use of all partitions, we also propose different ways to explore the solution landscape, including a significance clustering procedure. We test these approaches on synthetic networks and a real-world network using two contrasting community-detection algorithms: The algorithm that can identify more general structures requires more searches, and networks with clearer community structures require fewer searches. We also find that exploring the coarse-grained solution landscape can reveal complementary solutions and enable more reliable community detection.

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  • Received 27 May 2019
  • Revised 10 September 2019

DOI:https://doi.org/10.1103/PhysRevE.100.052308

©2019 American Physical Society

Physics Subject Headings (PhySH)

Networks

Authors & Affiliations

Joaquín Calatayud1, Rubén Bernardo-Madrid2, Magnus Neuman1, Alexis Rojas1, and Martin Rosvall1

  • 1Integrated Science Lab, Department of Physics, Umeå University, Sweden
  • 2Department of Conservation Biology, Estación Biológica de Doñana (EBD-CSIC), Spain

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Issue

Vol. 100, Iss. 5 — November 2019

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